Nephrocalcinosis
Overview
What is Nephocalcinosis?
Nephrocalcinosis is the term for an abnormal accumulation of mineral deposits within kidney tissue. It is a non-infectious condition affecting various fish species in aquaculture, including Atlantic salmon (Salmo salar), rainbow trout (Oncorhynchus mykiss), Atlantic cod, (Gadus morhua) 1, Nile Tilapia (Oreochromis niloticus) 2, cobia (Rachycentron canadum) 3 . It is primarily an accumulation of calcium phosphate deposits in the kidneys, leading to impaired kidney function and overall health, though in mild to moderate cases it can be reversed 4 5. Recirculating Aquaculture Systems (RAS) have a higher inherent risk than flow-through systems of fish developing the condition 6
Symptoms of Nephrocalcinosis
Common Symptoms
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Physical Signs:
- No obvious external signs: Severe cases may be visible on dissection, but most cases are mild and can only be detected through histology 7, 6
- Kidney Lesions: pronounced kidney lesions with a marbling and whitish mottling appearance, which are largely calcium deposits: confirmed histologically by von Kossa staining 4.
- Calcified deposits may appear as white longitudinal stripes in the kidney, or as mineralised material in the pseudobranch (the fish's reduced first gill arch) and stomach wall 8.
- Renal casts: Plugs of material visible, with the naked eye, within the tubles or ducts 4.
- No obvious external signs: Severe cases may be visible on dissection, but most cases are mild and can only be detected through histology 7, 6
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Behavioral Changes:
Progression of Symptoms
- Early Stages: Subtle signs such as reduced feed intake and slight lethargy, with mild mineralisation deposits in the kidneys 4.
- Advanced Stages: Pronounced physical symptoms, calcium deposits, and increased mortality if not managed 4.
- Impact on Fish Health: Nephrocalcinosis severely compromises kidney function, leading to impaired waste excretion, stress, and reduced growth rates 49.
- Increased mortality the first weeks after sea-transfer and secondary infections with bacteria and fungi are not uncommon 6
Causes of Nephrocalcinosis
Etiology
- Non-infectious Condition: Nephrocalcinosis is not caused by a pathogen but by environmental factors 4. Increased CO₂ and oxygen levels in the water raising the internal levels for the fish, which triggers complex compensations and ultimately leads to mineral accumulation 10
- Difference between species: Trout are more susceptible than Atlantic salmon, having a poorer tolerance to elevated CO₂ levels, they can also be affected longer 8. Atlantic salmon show a more inconsistent response to CO₂ levels, suggesting other environmental factors play a role 9.
Risk Factors
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Contributing Factors:
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Elevated CO₂ (Primary Risk Factor): Monitor CO₂ continuously. Keep levels below 13 mg/L where possible, and investigate immediately if levels exceed 20 mg/L 7, 5. Risk can increase during cold water temperature periods potentially due to decrease CO₂ stripping efficiency 9. Links have also been found with use of continuous light, but that could be elevated CO₂ due to more activity and feeding than use of winter light signal 11
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Hyperoxia — Elevated Dissolved Oxygen: A combination of hypercapnia and hyperoxia drives hypoventilation in fish, leading to respiratory acidosis and the internal acid-base disturbance that triggers mineral precipitation. Avoid sustained oxygen supersaturation, particularly when CO₂ levels are also elevated. The combined effect is greater than either factor alone 4, 10
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Premature seawater exposure: before smoltification can cause osmotic stress and result in unbalanced levels of ions in fish blood, increasing the risk for nephrocalcinosis. Align salinity introduction with photoperiod signals and verified smolt status 9.
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RAS (Recirculating Aquaculture Systems): carries a higher inherent risk than flow through systems, as CO₂ and oxygen management is more complex 6
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Increased salt loads through the feed and water may increase prevalence 10
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Diet-induced nephrocalcinosis has only been found for aquarium reared spotted wolffish (Anarhichas minor) 12. However ongoing research is looking at dietray factors, amongst others 13
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Diagnosis
Diagnostic Methods
- Clinical Examination: Gross examination may find kidney lesions with a marbling and whitish mottling appearance, but most cases require histopathology 6.
- Laboratory Tests:
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Histopathology: Microscopic examination of kidney tissues to identify calcium deposits and assess the extent of damage, the most precise method for assessing tissue damage and progression 6b
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X-ray / Radiography: Non invasive imaging of calcium deposits in the kidneys 5, 6b. It is cost-effective, does not require euthanasia, and enables monitoring of disease progression in individual fish 6b However, radiography has limited ability to assess soft tissue lesions and cannot reliably distinguish between pathologies such as nephrocalcinosis and chronic granulomatous inflammation with secondary calcification 6b.
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Ultrasound: Uses sound waves to detect different stages of nephrocalcinosis, potential to be used at same time as fish vaccination 15, 16
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Blood analysis: Key indicators include hypercalcaemia, elevated plasma magnesium, glucose, and AST, alongside raised plasma pH and reduced plasma chloride levels 6 7. Note that the use of anaesthesia during blood sampling can significantly influence plasma values and should be accounted for when planning and interpreting results.7.
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Differential Diagnosis
- Distinguishing Nephrocalcinosis from Other Conditions:
- Urocystolithiasis, which is the formation of stones of plugs in the urinary bladder. This can occur from nephrocalcinosis but also from other reasons. In severe cases it can lead to complete blockage of the urinary tract 14.
- Hemorrhagic Smolt Syndrome (HSS)/Hemorrhagic Diathesis(HD): can often occur simutaneously, though looking at time series, nephrocalcinosis was mainly found earlier 7
- BKD: Kidney damage caused by nephrocalcinosis can, in some cases, resemble visible findings associated with the notifiable (in Norway) disease bacterial kidney disease (BKD) 8.
- Chronic granulomatous inflammation with secondary calcification (= an enclosing of a problem the fish can’t remove, which then becomes mineralized with calcium) can appear the same as nephrocalcinosis when using x-ray radiography 6b
Treatment and Prevention
Treatment Options
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Current Treatments:
- Currently no licensed pharmaceutical treatment or medical intervention that removes or dissolves existing mineral deposits in fish kidneys.
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Supportive Care:
Preventive Measures
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Biosecurity Protocols:
- It is not an infectious disease.
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Farm Management Practices:
- Regular samples for histopathology, or x-ray radiography to detect early signs, as it can heal in milder cases. Particularly in the 6–8 weeks before planned sea transfer, as it can also indicate post-transfer survival 8, FHF, 2022.
- Gross examination of kidneys and urinary tract for white mineral build up, on dead fish 8
- Strict water quality management practices to maintain optimal conditions, treating CO₂ stripping and oxygen dosing as critical control points 9.
- Water Quality Testing: Regular assessment of water parameters such as temperature, CO₂, O₂, pH, salinity and photoperiod 9.
Case Studies
Real-World Examples
- Notable Cases:
- Norway (>2020): Nephrocalcinosis has been increasingly observed in Norwegian salmon farming, particularly in recirculating aquaculture systems (RAS). Research conducted by the Norwegian Veterinary Institute identified a significant rise in cases of nephrocalcinosis, prompting the industry to implement stricter monitoring and management practices to control CO₂ levels and improve water quality 8
Data Insights
Disease Impact by Country
Norway
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Nephrocalcinosis Incidence in Norway:
- The Norwegian Veterinary Institute 2024 fish health report stated nephrocalcinosis as a common and significant diagnosis affecting health for especially trout and to a lesser extent salmon 8
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Geographical Spread:
- In ongrowing facilities, nephrocalcinosis is typically detected within the first few months after seawater transfer, likely representing pre-existing damage from the hatchery stage 8
- In the Veterinary Institute’s records, nephrocalcinosis was detected in 54 submissions from 43 commercial salmonid farms, it was also found in turbot, pike, and in some samples from wild salmonids 8
- It is particularly challenging to monitor due to the lack of visible external symptoms in affected fish 6b.
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Economic Impact:
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Treatment & Management:
- Current control measures include improved water quality management 6b
- Recent advancements in diagnostic techniques, such as adapted x-ray imaging, have been developed to screen for nephrocalcinosis in live fish in the field 5, 6b.
- Collaboration between researchers and fish farmers is essential to improve understanding and management of the disease 5
Research and References
Latest Research Findings
Recent studies on Nephrocalcinosis in salmonids have focused on environmental drivers, pathophysiology and diagnostic advances. Here are some notable recent research findings:
- "# Nephrocalsinosis and mineral deposition in Atlantic salmon (Salmo salar L.) during smoltification under different commercial rearing conditions"
Reference: Sissener, N. H., Rasmussen, J., Hevroy, E., & Philip, A. J. P. (2026). Nephrocalsinosis and mineral deposition in Atlantic salmon (Salmo salar L.) during smoltification under different commercial rearing conditions. Aquaculture Reports, 48, 103572.
Link to study - "Radiological detection of nephrocalcinosis in farmed Atlantic salmon Salmo salar L."
Reference: Klykken, C., Dalum, A. S., Reed, A. K., Attramadal, K., Olsen, R. E., & Boissonnot, L. (2022). Radiological detection of nephrocalcinosis in farmed Atlantic salmon Salmo salar L. Journal of Fish Diseases, 45(12), 1883.
Link to study
Conclusion
Nephrocalcinosis remains a significant challenge for aquaculture, especially in RAS hatcheries and on growing facilities that affects fish late into the sea phase. By implementing robust water quality management practices, balanced nutrition, and regular health monitoring, fish health personnel can mitigate the impact of nephrocalcinosis and improve the welfare and sustainability of aquaculture operations.
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Last Modified: 2026-06-02
Tags: #Nephrocalcinosis, #Salmonoids, #Salmon, #AtlanticSalmon, #Trout, #RainbowTrout, #Norway, #environmentalconditions
Other Environmental & Physical Conditions
Citations:
[1] Damsgård, B., Bjørklund, F., Johnsen, H. K., & Toften, H. (2011). Short- and long-term effects of fish density and specific water flow on the welfare of Atlantic cod, Gadus morhua. Aquaculture, 322-323, 184–190. (https://www.webofscience.com/wos/woscc/full-record/WOS:000302314800024)
[2] Chen, C., Wooster, G., Getchell, R., Bowser, P., & Timmons, M. (2001). Nephrocalcinosis in Nile tilapia from a recirculation aquaculture system: A case report. Journal of Aquatic Animal Health, 13, 368–372. https://www.cabidigitallibrary.org/doi/full/10.5555/20023010615
[3] Klosterhoff, M. D. C., Virginia Fonseca, P., Sampaio, L. A. N. D., Ramos, L. R. V., Tesser, M. B., & Romano, L. A. (2015). Nephrocalcinosis and kidney stones in Rachycentron canadum. https://eafp.org/download/2015-volume35/issue_4/35-4-138-klosterhoff.pdf
[4] Minarova, H., Palikova, M., Kopp, R., Maly, O., Mares, J., Mikulikova, I., & Pikula, J. (2023). Nephrocalcinosis in farmed salmonids: diagnostic challenges associated with low performance and sporadic mortality. Frontiers in veterinary science, 10, 1121296. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10157097/
[5] Nofima. "Carbone dioxide a cause of kidney stones in rainbow trout" Updated: June 2025. by Reidun Lilleholt Kraugerud (https://nofima.com/results/has-documented-cause-of-kidney-stones-in-rainbow-trout/) Accessed May, 2026.
[6] Klykken, C., Reed, A. K., Dalum, A. S., Olsen, R. E., Moe, M. K., Attramadal, K. J. K., & Boissonnot, L. (2022). Physiological changes observed in farmed Atlantic salmon (Salmo salar L.) with nephrocalcinosis. Aquaculture, 554, 738104. (https://www.sciencedirect.com/science/article/pii/S0044848622002204)
[6b] Klykken, C., Dalum, A. S., Reed, A. K., Attramadal, K., Olsen, R. E., & Boissonnot, L. (2022). Radiological detection of nephrocalcinosis in farmed Atlantic salmon Salmo salar L. Journal of Fish Diseases, 45(12), 1883. https://pmc.ncbi.nlm.nih.gov/articles/PMC9804365/
[7] (FHF) Forskningsfondet for fiskeri og akvakultur. (2024) Project Leader: Arve Nilsen. "Nephrocalcinosis and hemorrhagic smolt syndrome: Causal relationships and opportunities for prevention (STONEHUNT)" (https://www.fhf.no/prosjekter/prosjektbasen/901588/) Accessed May, 2026.
[8] Moldal T, Wiik-Nielsen J, Oliveira VHS, Svendsen JC and Sommerset I. Norwegian Fish Health Report 2024, Norwegian Veterinary Institute Report series 1b/2025, published by the Norwegian Veterinary Institute 2025 (https://www.vetinst.no/rapporter-og-publikasjoner/rapporter/2025/norwegian-fish-health-report-2024/_/attachment/inline/6b11b72c-ee8f-4529-921f-1a3d85dc419e:2d59843d7c1e34e9200669ae47f2974d8ee51b6a/Fish%20Health%20Report%202024.pdf)
[9] Klykken, C., Khan, E., Karlsen, C., Reed, A. K., Attramadal, K. J. K., Olsen, R. E., & Boissonnot, L. (2023). Nephrocalcinosis in juvenile farmed Atlantic Salmon (Salmo salar) may be linked to osmoregulatory stress. Journal of Fish Diseases, 46, 943–956. https://doi.org/10.1111/jfd.13815
[10] Takvam, M., Wood, C.M., Kryvi, H. & Nilsen, T.O. (2023) "Role of the kidneys in acid-base regulation and ammonia excretion in freshwater and seawater fish: implications for nephrocalcinosis" Frontiers in Physiology DOI: 10.3389/fphys.2023.1226068 (https://www.frontiersin.org/articles/10.3389/fphys.2023.1226068)
[11] Sissener, N. H., Rasmussen, J., Hevroy, E., & Philip, A. J. P. (2026). Nephrocalsinosis and mineral deposition in Atlantic salmon (Salmo salar L.) during smoltification under different commercial rearing conditions. Aquaculture Reports, 48, 103572. https://www.sciencedirect.com/science/article/pii/S2352513426002127
[12] Béland, K., Rousseau, C., & Lair, S. (2024). Diet-induced nephrocalcinosis in aquarium-raised juvenile spotted wolffish Anarhichas minor. Diseases of Aquatic Organisms, 157, 19-30. https://pubmed.ncbi.nlm.nih.gov/38236079/
[13] Peter Vilheim Skov. DTU Orbit. Project dates: 2026-2029. Environmental and dietary causes of nephrocalcinosis in salmonid aquaculture. Funded by Independent Research Fund Denmark. https://orbit.dtu.dk/en/projects/environmental-and-dietary-causes-of-nephrocalcinosis-in-salmonid-/ Accessed June, 2026
[14] Dalum, A. S., M.Alarcon, P.Gretarsson, et al. 2026. “Characterisation of Urocystolithiasis in Farmed Atlantic Salmon (Salmo salar L.): Histopathological Features and Pathophysiological Considerations.” Journal of Fish Diseases49, no. 5: e70099. https://doi.org/10.1111/jfd.70099.(https://onlinelibrary.wiley.com/doi/10.1111/jfd.70099)
[15] GreenFox Marine. (n.d.). Automatic gender sorting machine for fish https://greenfoxmarine.no/en/gender-sorting-machine/ Accessed June 2026
[16] Econexus. (2024, March 15). Farming (fresh and seawater). https://econexus.cl/en/services/farming/ Accessed June 2026